BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A09SP1|AL429322
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1649 0.0
>3x_Contig1757
Length = 24754
Score = 1649 bits (828), Expect = 0.0
Identities = 834/840 (99%)
Strand = Plus / Plus
Query: 3 ggcttctcttttaaagattggttgaccaggtcttagagtaatccaactccatggggaagc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5577 ggcttctcttttaaagattggttgaccaggtcttagagtaatccaactccatggggaagc 5636
Query: 63 atcggcttctcttttcttcaaatcatccttgtcagcgaaagcagcttcagcgatggtggt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5637 atcggcttctcttttcttcaaatcatccttgtcagcgaaagcagcttcagcgatggtggt 5696
Query: 123 gtttaagaatagaataccagtktgggttccgttattaacaggcaacaaggaaacttcatc 182
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5697 gtttaagaatagaataccagtgtgggttccgttattaacaggcaacaaggaaacttcatc 5756
Query: 183 cccggttaagtcaatgaatccaatcaaggcttcttctggaaccgaaattggaagatcgtc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5757 cccggttaagtcaatgaatccaatcaaggcttcttctggaaccgaaattggaagatcgtc 5816
Query: 243 gatgtcagtttcggtagaaactggagcagccataacaacggaaattaaagcagtagatgc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5817 gatgtcagtttcggtagaaactggagcagccataacaacggaaattaaagcagtagatgc 5876
Query: 303 ggctaatatagtagagaatttcataatattggatagttcaaattggatagttgggtttgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5877 ggctaatatagtagagaatttcataatattggatagttcaaattggatagttgggtttgt 5936
Query: 363 ataatttagattaaggtgaagttcaggataataaagacagaaaaagatcagacgagttgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5937 ataatttagattaaggtgaagttcaggataataaagacagaaaaagatcagacgagttgg 5996
Query: 423 gctttagatgctctggtttgcttgttctaatatactatattgamattactattgamacaa 482
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 5997 gctttagatgctctggtttgcttgttctaatatactatattgaaattactattgaaacaa 6056
Query: 483 acttagaacaataccataacatcctatcaatcaagggtcctttatatatkaattttcccg 542
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6057 acttagaacaataccataacatcctatcaatcaagggtcctttatatatgaattttcccg 6116
Query: 543 aaatccgatcacccagtgagcttgaacagcaaaccatttcgtcttaaacagataacaacc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6117 aaatccgatcacccagtgagcttgaacagcaaaccatttcgtcttaaacagataacaacc 6176
Query: 603 tctaaaaatgtcactgtcttacgattcacaaactgcagacatcgaaattgaagtaacaga 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6177 tctaaaaatgtcactgtcttacgattcacaaactgcagacatcgaaattgaagtaacaga 6236
Query: 663 ttagtatgaggttcaaaaaccacattattggaatttcccctcttcatacaaagcctgtya 722
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6237 ttagtatgaggttcaaaaaccacattattggaatttcccctcttcatacaaagcctgtca 6296
Query: 723 aaattaacttttgcacactactgtatagtttcaatacataacgagctttacatgacagtt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6297 aaattaacttttgcacactactgtatagtttcaatacataacgagctttacatgacagtt 6356
Query: 783 taggaaagagcactcatttcataccgttcaaaagtctacttcagggacacatacmacatc 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6357 taggaaagagcactcatttcataccgttcaaaagtctacttcagggacacatacaacatc 6416
Score = 102 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 3 ggcttctcttttaaagattggttgaccaggtcttagagtaatccaactccatggggaagc 62
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 5415 ggcttctcttttaaagattggttgaccaggtcttagagtgatccagctccatggggaggc 5474
Query: 63 atc 65
|||
Sbjct: 5475 atc 5477
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5876
Number of Sequences: 1807
Number of extensions: 5876
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)